| Pick | Player | Position | From | To |
|---|---|---|---|---|
| 1 | David Nied | RHP | ATL | COL |
| 3 | Charlie Hayes | 3B | NYY | COL |
| 5 | Darren Holmes | RHP | MIL | COL |
| 7 | Jerald Clark | OF | SD | COL |
| 9 | Kevin Reimer | OF | TEX | COL |
| 11 | Eric Young | 2B | LAD | COL |
| 13 | Jody Reed | 2B | BOS | COL |
| 15 | Scott Aldred | LHP | DET | COL |
| 17 | Alex Cole | OF | PIT | COL |
| 19 | Joe Girardi | C | CHC | COL |
| 21 | Willie Blair | RHP | HOU | COL |
| 23 | Jay Owens | C | MIN | COL |
| 25 | Andy Ashby | RHP | PHI | COL |